ENSGALG00000002653


Gallus gallus

Features
Gene ID: ENSGALG00000002653
  
Biological name :NCBP3
  
Synonyms : NCBP3 / nuclear cap-binding protein subunit 3
  
Possible biological names infered from orthology : nuclear cap binding subunit 3 / Q53F19 / Q8BZR9
  
Species: Gallus gallus
  
Chr. number: 19
Strand: -1
Band:
Gene start: 5130010
Gene end: 5145174
  
Corresponding Affymetrix probe sets: Gga.15221.1.S1_s_at (Chicken Array)   Gga.19680.1.A1_at (Chicken Array)   Gga.19680.1.S1_s_at (Chicken Array)   Gga.9798.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000004171
NCBI entrez gene - 417552     See in Manteia.
RefSeq - NM_001012805
RefSeq - XM_015295738
RefSeq Peptide - NP_001012823
swissprot - F1NGX2
Ensembl - ENSGALG00000002653
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ncbp3ENSDARG00000044597Danio rerio
 NCBP3ENSG00000074356Homo sapiens
 Ncbp3ENSMUSG00000020783Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily
 IPR019416  Nuclear cap-binding protein subunit 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051607 defense response to virus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0000339 RNA cap binding IEA
 molecular_functionGO:0000340 RNA 7-methylguanosine cap binding IEA
 molecular_functionGO:0003729 mRNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr