ENSMUSG00000020783


Mus musculus

Features
Gene ID: ENSMUSG00000020783
  
Biological name :Ncbp3
  
Synonyms : Ncbp3 / Nuclear cap-binding protein subunit 3 / Q8BZR9
  
Possible biological names infered from orthology : nuclear cap binding subunit 3 / Q53F19
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B4
Gene start: 73047783
Gene end: 73089317
  
Corresponding Affymetrix probe sets: 10378271 (MoGene1.0st)   1423118_at (Mouse Genome 430 2.0 Array)   1439363_at (Mouse Genome 430 2.0 Array)   1445617_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000021135
NCBI entrez gene - 66874     See in Manteia.
MGI - MGI:1914124
RefSeq - NM_025818
RefSeq Peptide - NP_080094
swissprot - Q8BZR9
Ensembl - ENSMUSG00000020783
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ncbp3ENSDARG00000044597Danio rerio
 NCBP3ENSGALG00000002653Gallus gallus
 NCBP3ENSG00000074356Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019416  Nuclear cap-binding protein subunit 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006370 7-methylguanosine mRNA capping IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:0051607 defense response to virus ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0000339 RNA cap binding IDA
 molecular_functionGO:0000340 RNA 7-methylguanosine cap binding ISO
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000274 enlarged heart "increase over normal size of the heart" [J:29971]
Show

Allelic Composition: Mmachctm1.1(NCOM)Mfgc/Mmachctm1.1(NCOM)Mfgc
Genetic Background: C57BL/6N-Mmachctm1.1(NCOM)Mfgc/Tcp

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr