ENSGALG00000002813


Gallus gallus

Features
Gene ID: ENSGALG00000002813
  
Biological name :RPS10
  
Synonyms : RPS10
  
Possible biological names infered from orthology : P46783 / P63325 / ribosomal protein S10 / RPS10-NUDT3 / RPS10-NUDT3 readthrough
  
Species: Gallus gallus
  
Chr. number: 26
Strand: 1
Band:
Gene start: 4376881
Gene end: 4382436
  
Corresponding Affymetrix probe sets: Gga.9454.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000004437
Ensembl peptide - ENSGALP00000052315
NCBI entrez gene - 419904     See in Manteia.
RefSeq - NM_001257297
RefSeq Peptide - NP_001244226
swissprot - E1C4N0
swissprot - A0A1D5PHN5
Ensembl - ENSGALG00000002813
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rps10ENSDARG00000034897Danio rerio
 RPS10ENSG00000124614Homo sapiens
 RPS10-NUDT3ENSG00000270800Homo sapiens
 Rps10ENSMUSG00000052146Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005326  Plectin/S10, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000028 ribosomal small subunit assembly IBA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IBA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr