ENSGALG00000002908


Gallus gallus

Features
Gene ID: ENSGALG00000002908
  
Biological name :TRAIP
  
Synonyms : E3 ubiquitin-protein ligase TRAIP / TRAIP
  
Possible biological names infered from orthology : Q8VIG6 / Q9BWF2 / TRAF interacting protein
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 2527220
Gene end: 2545564
  
Corresponding Affymetrix probe sets: Gga.15815.1.A1_at (Chicken Array)   Gga.15815.1.S1_s_at (Chicken Array)   GgaAffx.1860.1.S1_at (Chicken Array)   GgaAffx.1860.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000042447
Ensembl peptide - ENSGALP00000062781
Ensembl peptide - ENSGALP00000061479
Ensembl peptide - ENSGALP00000060521
Ensembl peptide - ENSGALP00000056250
Ensembl peptide - ENSGALP00000046671
Ensembl peptide - ENSGALP00000004571
NCBI entrez gene - 415927     See in Manteia.
RefSeq - NM_001030586
RefSeq - XM_015292819
RefSeq - XM_015292820
RefSeq Peptide - NP_001025757
swissprot - A0A1D5P1X8
swissprot - A0A1L1RVC6
swissprot - R4GJW9
swissprot - F1NBY3
swissprot - A0A1L1RRQ9
swissprot - A0A1L1RP01
swissprot - A0A1D5PTK2
Ensembl - ENSGALG00000002908
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 traipENSDARG00000011262Danio rerio
 TRAIPENSG00000183763Homo sapiens
 TraipENSMUSG00000032586Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR009053  Prefoldin
 IPR011016  Zinc finger, RING-CH-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0010804 negative regulation of tumor necrosis factor-mediated signaling pathway IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0032688 negative regulation of interferon-beta production IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0005057 obsolete signal transducer activity, downstream of receptor IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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