ENSGALG00000003285


Gallus gallus

Features
Gene ID: ENSGALG00000003285
  
Biological name :CDHR2
  
Synonyms : cadherin related family member 2 / CDHR2
  
Possible biological names infered from orthology : E9Q7P9 / Q9BYE9
  
Species: Gallus gallus
  
Chr. number: 13
Strand: -1
Band:
Gene start: 10365016
Gene end: 10375987
  
Corresponding Affymetrix probe sets: Gga.8996.1.S1_at (Chicken Array)   GgaAffx.2050.1.A1_at (Chicken Array)   GgaAffx.2055.1.S1_s_at (Chicken Array)   GgaAffx.25796.1.S1_at (Chicken Array)   GgaAffx.25796.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005187
NCBI entrez gene - 416223     See in Manteia.
RefSeq - XM_015293880
swissprot - F1NLE0
Ensembl - ENSGALG00000003285
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDHR2ENSDARG00000068586Danio rerio
 CDHR2ENSG00000074276Homo sapiens
 Cdhr2ENSMUSG00000034918Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CDHR1 / cadherin-related family member 1 precursor / Q8VHP6* / Q96JP9* / cadherin related family member 1*ENSGALG0000000231417


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR030276  Cadherin-related family member 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0030855 epithelial cell differentiation IEA
 biological_processGO:0032532 regulation of microvillus length IEA
 biological_processGO:0044331 cell-cell adhesion mediated by cadherin IEA
 biological_processGO:0060243 negative regulation of cell growth involved in contact inhibition IEA
 biological_processGO:0090675 intermicrovillar adhesion IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005903 brush border IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IEA
 cellular_componentGO:0031526 brush border membrane IEA
 cellular_componentGO:0031528 microvillus membrane IEA
 cellular_componentGO:0044214 spanning component of plasma membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0050839 cell adhesion molecule binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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