ENSGALG00000002314


Gallus gallus

Features
Gene ID: ENSGALG00000002314
  
Biological name :CDHR1
  
Synonyms : cadherin-related family member 1 precursor / CDHR1
  
Possible biological names infered from orthology : cadherin related family member 1 / Q8VHP6 / Q96JP9
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 3035224
Gene end: 3068706
  
Corresponding Affymetrix probe sets: GgaAffx.21818.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000040376
NCBI entrez gene - 414847     See in Manteia.
RefSeq - NM_001001759
RefSeq Peptide - NP_001001759
swissprot - F1NKC9
Ensembl - ENSGALG00000002314
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDHR1 (1 of many)ENSDARG00000104756Danio rerio
 cdhr1aENSDARG00000004643Danio rerio
 CDHR1ENSG00000148600Homo sapiens
 Cdhr1ENSMUSG00000021803Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CDHR2 / cadherin related family member 2 / E9Q7P9* / Q9BYE9*ENSGALG0000000328526


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0008594 photoreceptor cell morphogenesis IEA
 biological_processGO:0009987 cellular process IEA
 biological_processGO:0035845 photoreceptor cell outer segment organization IEA
 biological_processGO:0045494 photoreceptor cell maintenance IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0042622 photoreceptor outer segment membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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