ENSGALG00000003326


Gallus gallus

Features
Gene ID: ENSGALG00000003326
  
Biological name :AMACR
  
Synonyms : alpha-methylacyl-CoA racemase / AMACR
  
Possible biological names infered from orthology : O09174 / Q9UHK6
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 10347477
Gene end: 10368417
  
Corresponding Affymetrix probe sets: GgaAffx.11974.1.S1_at (Chicken Array)   GgaAffx.2077.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000038409
NCBI entrez gene - 427429     See in Manteia.
RefSeq - NM_001031448
RefSeq Peptide - NP_001026619
swissprot - F1NKY1
Ensembl - ENSGALG00000003326
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 amacrENSDARG00000057435Danio rerio
 AMACRENSG00000242110Homo sapiens
 AmacrENSMUSG00000022244Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SUGCT / succinyl-CoA:glutarate-CoA transferase / Q7TNE1* / Q9HAC7* / Succinate--hydroxymethylglutarate CoA-transferase *ENSGALG0000003175821


Protein motifs (from Interpro)
Interpro ID Name
 IPR003673  CoA-transferase family III
 IPR023606  CoA-transferase family III domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008206 bile acid metabolic process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005777 peroxisome IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0008111 alpha-methylacyl-CoA racemase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol
Synthesis of bile acids and bile salts via 24-hydroxycholesterol
Beta-oxidation of pristanoyl-CoA
Peroxisomal protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr