ENSGALG00000003484


Gallus gallus

Features
Gene ID: ENSGALG00000003484
  
Biological name :BARD1
  
Synonyms : BARD1 / BRCA1-associated RING domain protein 1
  
Possible biological names infered from orthology : BRCA1 associated RING domain 1 / O70445 / Q99728
  
Species: Gallus gallus
  
Chr. number: 7
Strand: -1
Band:
Gene start: 4211635
Gene end: 4254770
  
Corresponding Affymetrix probe sets: GgaAffx.2172.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005502
Ensembl peptide - ENSGALP00000042058
NCBI entrez gene - 424010     See in Manteia.
RefSeq - NM_001031246
RefSeq Peptide - NP_001026417
swissprot - F7BF09
swissprot - R4GIW2
Ensembl - ENSGALG00000003484
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bard1ENSDARG00000076733Danio rerio
 BARD1ENSG00000138376Homo sapiens
 Bard1ENSMUSG00000026196Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ANKRD12 / ankyrin repeat domain 12 / Q6UB98*ENSGALG0000000839915
BCORL1 / BCL6 corepressor like 1 / A2AQH4* / Q5H9F3* / BCL-6 corepressor-like protein 1 *ENSGALG0000000397612
SLF1* / Q8R3P9* / Q9BQI6* / SMC5-SMC6 complex localization factor 1*ENSGALG0000002793210
E9Q4F7* / Q6UB99* / ANKRD11* / ankyrin repeat domain 11* / Ankyrin repeat domain-containing protein 11 *ENSGALG0000000622210
BCOR / BCL6 corepressor / Q6W2J9* / Q8CGN4*ENSGALG000000162456
ENSGALG000000432744
Q8N7Z5* / ANKRD31* / ankyrin repeat domain 31*ENSGALG000000457572


Protein motifs (from Interpro)
Interpro ID Name
 IPR001357  BRCT domain
 IPR001841  Zinc finger, RING-type
 IPR002110  Ankyrin repeat
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR020683  Ankyrin repeat-containing domain
 IPR033097  BRCA1-associated RING domain protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0042325 regulation of phosphorylation IEA
 biological_processGO:0043065 positive regulation of apoptotic process IEA
 biological_processGO:0043066 negative regulation of apoptotic process IEA
 biological_processGO:0046826 negative regulation of protein export from nucleus IEA
 biological_processGO:0085020 protein K6-linked ubiquitination IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0031436 BRCA1-BARD1 complex IEA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IEA
 cellular_componentGO:0070531 BRCA1-A complex IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
HDR through Single Strand Annealing (SSA)
HDR through Homologous Recombination (HRR)
UCH proteinases
Metalloprotease DUBs
Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks
Resolution of D-loop Structures through Holliday Junction Intermediates
Nonhomologous End-Joining (NHEJ)
Homologous DNA Pairing and Strand Exchange
Processing of DNA double-strand break ends
Presynaptic phase of homologous DNA pairing and strand exchange
G2/M DNA damage checkpoint


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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