ENSGALG00000003651


Gallus gallus

Features
Gene ID: ENSGALG00000003651
  
Biological name :NT5C3B
  
Synonyms : 7-methylguanosine phosphate-specific 5-nucleotidase / NT5C3B / Q5ZKF6
  
Possible biological names infered from orthology : 5-nucleotidase, cytosolic IIIB / Q3UFY7 / Q969T7
  
Species: Gallus gallus
  
Chr. number: 27
Strand: -1
Band:
Gene start: 5108613
Gene end: 5113311
  
Corresponding Affymetrix probe sets: Gga.4321.2.S1_s_at (Chicken Array)   GgaAffx.12231.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005776
NCBI entrez gene - 420034     See in Manteia.
RefSeq - XM_015299604
RefSeq - NM_001006334
RefSeq - XM_015299602
RefSeq - XM_015299603
RefSeq Peptide - NP_001006334
swissprot - Q5ZKF6
Ensembl - ENSGALG00000003651
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NT5C3BENSG00000141698Homo sapiens
 Nt5c3bENSMUSG00000017176Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NT5C3A / Q5ZID6 / Cytosolic 5-nucleotidase 3A / Nt5c3* / Q9H0P0* / Q9D020* / 5-nucleotidase, cytosolic III* / 5-nucleotidase, cytosolic IIIA*ENSGALG0000003139757


Protein motifs (from Interpro)
Interpro ID Name
 IPR006434  Pyrimidine 5"-nucleotidase, eukaryotic
 IPR023214  HAD superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009117 nucleotide metabolic process IEA
 biological_processGO:0016311 dephosphorylation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000287 magnesium ion binding IEA
 molecular_functionGO:0008253 5"-nucleotidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
mRNA decay by 3 to 5 exoribonuclease


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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