ENSMUSG00000017176


Mus musculus

Features
Gene ID: ENSMUSG00000017176
  
Biological name :Nt5c3b
  
Synonyms : 5-nucleotidase, cytosolic IIIB / Nt5c3b / Q3UFY7
  
Possible biological names infered from orthology : Q969T7
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: D
Gene start: 100422321
Gene end: 100441808
  
Corresponding Affymetrix probe sets: 10391130 (MoGene1.0st)   1430559_at (Mouse Genome 430 2.0 Array)   1449633_s_at (Mouse Genome 430 2.0 Array)   1451180_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000090361
Ensembl peptide - ENSMUSP00000103021
Ensembl peptide - ENSMUSP00000103022
Ensembl peptide - ENSMUSP00000090360
Ensembl peptide - ENSMUSP00000103020
NCBI entrez gene - 68106     See in Manteia.
MGI - MGI:1915356
RefSeq - XM_017314728
RefSeq - NM_001102650
RefSeq - NM_026561
RefSeq - XM_017314724
RefSeq - XM_017314725
RefSeq - XM_017314726
RefSeq - XM_017314727
RefSeq - XM_006534043
RefSeq - XM_006534046
RefSeq - XM_006534047
RefSeq - XM_011249201
RefSeq - XM_017314723
RefSeq Peptide - NP_001096120
RefSeq Peptide - NP_080837
swissprot - Q3UFY7
swissprot - A0A0R4J146
Ensembl - ENSMUSG00000017176
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NT5C3BENSGALG00000003651Gallus gallus
 NT5C3BENSG00000141698Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Nt5c3 / Q9D020 / 5-nucleotidase, cytosolic III / NT5C3A* / Q9H0P0* / 5-nucleotidase, cytosolic IIIA*ENSMUSG0000002978053


Protein motifs (from Interpro)
Interpro ID Name
 IPR006434  Pyrimidine 5"-nucleotidase, eukaryotic
 IPR023214  HAD superfamily
 IPR036412  HAD-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0009117 nucleotide metabolic process IEA
 biological_processGO:0016311 dephosphorylation IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000287 magnesium ion binding IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0008253 5"-nucleotidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
mRNA decay by 3 to 5 exoribonuclease


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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