ENSMUSG00000029780


Mus musculus

Features
Gene ID: ENSMUSG00000029780
  
Biological name :Nt5c3
  
Synonyms : 5-nucleotidase, cytosolic III / Nt5c3 / Q9D020
  
Possible biological names infered from orthology : 5-nucleotidase, cytosolic IIIA / NT5C3A / Q9H0P0
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: B3
Gene start: 56882400
Gene end: 56923932
  
Corresponding Affymetrix probe sets: 10544982 (MoGene1.0st)   1431306_at (Mouse Genome 430 2.0 Array)   1451050_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000031793
Ensembl peptide - ENSMUSP00000138606
Ensembl peptide - ENSMUSP00000145230
Ensembl peptide - ENSMUSP00000145410
Ensembl peptide - ENSMUSP00000098918
NCBI entrez gene - 107569     See in Manteia.
MGI - MGI:1927186
RefSeq - XM_011241111
RefSeq - NM_026004
RefSeq - XM_006505272
RefSeq - XM_006505273
RefSeq - XM_006505274
RefSeq - XM_006505275
RefSeq - XM_006505276
RefSeq - NM_001252374
RefSeq Peptide - NP_001239303
RefSeq Peptide - NP_080280
swissprot - A0A0N4SW80
swissprot - S4R2D9
swissprot - A0A0N4SVS9
swissprot - Q9D020
Ensembl - ENSMUSG00000029780
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nt5c3aENSDARG00000058597Danio rerio
 NT5C3AENSGALG00000031397Gallus gallus
 NT5C3AENSG00000122643Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Nt5c3b / Q3UFY7 / 5-nucleotidase, cytosolic IIIB / Q969T7*ENSMUSG0000001717648


Protein motifs (from Interpro)
Interpro ID Name
 IPR006434  Pyrimidine 5"-nucleotidase, eukaryotic
 IPR023214  HAD superfamily
 IPR036412  HAD-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009117 nucleotide metabolic process IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0046085 adenosine metabolic process IEA
 biological_processGO:0051607 defense response to virus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000287 magnesium ion binding IEA
 molecular_functionGO:0008253 5"-nucleotidase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Pyrimidine catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr