ENSGALG00000003693


Gallus gallus

Features
Gene ID: ENSGALG00000003693
  
Biological name :MACF1
  
Synonyms : MACF1 / microtubule-actin crosslinking factor 1
  
Possible biological names infered from orthology : Q9UPN3
  
Species: Gallus gallus
  
Chr. number: 23
Strand: 1
Band:
Gene start: 5359116
Gene end: 5470470
  
Corresponding Affymetrix probe sets: Gga.12768.1.S1_s_at (Chicken Array)   Gga.7175.1.S1_at (Chicken Array)   GgaAffx.20775.1.S1_s_at (Chicken Array)   GgaAffx.20977.1.S1_s_at (Chicken Array)   GgaAffx.2309.1.S1_s_at (Chicken Array)   GgaAffx.2309.2.S1_s_at (Chicken Array)   GgaAffx.25948.1.S1_at (Chicken Array)   GgaAffx.25948.1.S1_x_at (Chicken Array)   GgaAffx.25948.2.S1_s_at (Chicken Array)   GgaAffx.25948.5.S1_s_at (Chicken Array)   GgaAffx.25948.6.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000056761
Ensembl peptide - ENSGALP00000049817
Ensembl peptide - ENSGALP00000058569
Ensembl peptide - ENSGALP00000005847
Ensembl peptide - ENSGALP00000055630
Ensembl peptide - ENSGALP00000049838
NCBI entrez gene - 419671     See in Manteia.
RefSeq - XM_015297905
RefSeq - XM_015297898
RefSeq - XM_015297899
RefSeq - XM_015297900
RefSeq - XM_015297901
RefSeq - XM_015297903
RefSeq - XM_015297904
RefSeq - XM_015297867
RefSeq - XM_015297868
RefSeq - XM_015297869
RefSeq - XM_015297870
RefSeq - XM_015297871
RefSeq - XM_015297872
RefSeq - XM_015297873
RefSeq - XM_015297874
RefSeq - XM_015297875
RefSeq - XM_015297876
RefSeq - XM_015297877
RefSeq - XM_015297878
RefSeq - XM_015297879
RefSeq - XM_015297881
RefSeq - XM_015297882
RefSeq - XM_015297883
RefSeq - XM_015297884
RefSeq - XM_015297885
RefSeq - XM_015297886
RefSeq - XM_015297887
RefSeq - XM_015297888
RefSeq - XM_015297889
RefSeq - XM_015297890
RefSeq - XM_015297892
RefSeq - XM_015297893
RefSeq - XM_015297894
RefSeq - XM_015297895
RefSeq - XM_015297896
RefSeq - XM_015297897
swissprot - E1C245
swissprot - A0A1D5Q000
swissprot - A0A1D5PV03
swissprot - A0A1D5PRV1
swissprot - A0A1D5PAS4
swissprot - A0A1D5PAQ4
Ensembl - ENSGALG00000003693
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 macf1aENSDARG00000028533Danio rerio
 MACF1ENSG00000127603Homo sapiens
 Macf1ENSMUSG00000028649Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DST / dystonin / Q03001* / Q91ZU6*ENSGALG0000001628956
DSP / desmoplakin / E9Q557* / P15924*ENSGALG0000001279010
EVPL / envoplakin / Q92817* / Q9D952*ENSGALG000000021087
PPL / periplakin / O60437*ENSGALG000000022016
EPPK1* / epiplakin 1*ENSGALG000000343921
EPPK1* / epiplakin 1*ENSGALG000000341101


Protein motifs (from Interpro)
Interpro ID Name
 IPR001589  Actinin-type actin-binding domain, conserved site
 IPR001715  Calponin homology domain
 IPR002017  Spectrin repeat
 IPR002048  EF-hand domain
 IPR003108  GAR domain
 IPR011992  EF-hand domain pair
 IPR018159  Spectrin/alpha-actinin
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030334 regulation of cell migration IEA
 biological_processGO:0032886 regulation of microtubule-based process IEA
 biological_processGO:0043001 Golgi to plasma membrane protein transport IEA
 biological_processGO:0045773 positive regulation of axon extension IEA
 biological_processGO:0051893 regulation of focal adhesion assembly IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0032587 ruffle membrane IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0045296 cadherin binding IEA
 molecular_functionGO:0051011 microtubule minus-end binding IEA
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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