ENSGALG00000004645


Gallus gallus

Features
Gene ID: ENSGALG00000004645
  
Biological name :TBC1D13
  
Synonyms : TBC1D13 / TBC1 domain family member 13
  
Possible biological names infered from orthology : Q8R3D1 / Q9NVG8
  
Species: Gallus gallus
  
Chr. number: 17
Strand: 1
Band:
Gene start: 5802342
Gene end: 5810788
  
Corresponding Affymetrix probe sets: Gga.13409.1.S1_s_at (Chicken Array)   Gga.9963.1.S1_at (Chicken Array)   GgaAffx.26271.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007386
Ensembl peptide - ENSGALP00000058287
Ensembl peptide - ENSGALP00000050072
NCBI entrez gene - 771771     See in Manteia.
RefSeq - XM_001233463
swissprot - E1BXI8
swissprot - A0A1D5PZ78
swissprot - A0A1D5PBE5
Ensembl - ENSGALG00000004645
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9NVG8ENSG00000107021Homo sapiens
 Q8R3D1ENSMUSG00000039678Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBC1D5 / TBC1 domain family member 5 / Q80XQ2* / Q92609*ENSGALG0000001125124


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IEA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr