ENSGALG00000011251


Gallus gallus

Features
Gene ID: ENSGALG00000011251
  
Biological name :TBC1D5
  
Synonyms : TBC1D5 / TBC1 domain family member 5
  
Possible biological names infered from orthology : Q80XQ2 / Q92609
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 34723999
Gene end: 35027284
  
Corresponding Affymetrix probe sets: Gga.12376.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018335
Ensembl peptide - ENSGALP00000055592
Ensembl peptide - ENSGALP00000046013
NCBI entrez gene - 420646     See in Manteia.
RefSeq - XM_015281812
RefSeq - XM_015281809
RefSeq - XM_015281810
RefSeq - XM_015281811
RefSeq - XM_015281808
swissprot - A0A1D5PRR4
swissprot - A0A1D5P039
swissprot - E1BRI4
Ensembl - ENSGALG00000011251
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbc1d5ENSDARG00000036212Danio rerio
 Q92609ENSG00000131374Homo sapiens
 Q80XQ2ENSMUSG00000023923Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBC1D13 / TBC1 domain family member 13 / Q8R3D1* / Q9NVG8*ENSGALG0000000464512


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002092 positive regulation of receptor internalization IEA
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0016236 macroautophagy IEA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0042147 retrograde transport, endosome to Golgi IEA
 biological_processGO:0042594 response to starvation IEA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0005776 autophagosome IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0030122 AP-2 adaptor complex IEA
 cellular_componentGO:0030904 retromer complex IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:1990316 Atg1/ULK1 kinase complex IEA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA
 molecular_functionGO:0035612 AP-2 adaptor complex binding IEA
 molecular_functionGO:1905394 retromer complex binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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