ENSGALG00000004871


Gallus gallus

Features
Gene ID: ENSGALG00000004871
  
Biological name :RPS24
  
Synonyms : 40S ribosomal protein S24 isoform 1 / RPS24
  
Possible biological names infered from orthology : P62847 / ribosomal protein S24
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 13151895
Gene end: 13157847
  
Corresponding Affymetrix probe sets: Gga.3877.1.S1_a_at (Chicken Array)   GgaAffx.21286.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007763
Ensembl peptide - ENSGALP00000063578
Ensembl peptide - ENSGALP00000061995
Ensembl peptide - ENSGALP00000051994
Ensembl peptide - ENSGALP00000047721
NCBI entrez gene - 423726     See in Manteia.
RefSeq - XM_015288213
RefSeq - NM_001277342
RefSeq - NM_001277343
RefSeq - NM_001277344
RefSeq Peptide - NP_001264273
RefSeq Peptide - NP_001264272
RefSeq Peptide - NP_001264271
swissprot - A0A1D5PGS1
swissprot - F1NF89
swissprot - A0A1D5P4V9
swissprot - A0A1L1RXJ8
swissprot - A0A1L1RT65
Ensembl - ENSGALG00000004871
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rps24ENSDARG00000039347Danio rerio
 RPS24ENSG00000138326Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001976  Ribosomal protein S24e
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily
 IPR012678  Ribosomal protein L23/L15e core domain superfamily
 IPR018098  Ribosomal S24e conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0006412 translation IEA
 biological_processGO:0034101 erythrocyte homeostasis IEA
 biological_processGO:0042274 ribosomal small subunit biogenesis IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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