ENSGALG00000004999


Gallus gallus

Features
Gene ID: ENSGALG00000004999
  
Biological name :TAF7
  
Synonyms : TAF7 / TATA-box binding protein associated factor 7
  
Possible biological names infered from orthology : Q15545 / Q9R1C0 / Transcription initiation factor TFIID subunit 7
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 2059448
Gene end: 2065615
  
Corresponding Affymetrix probe sets: Gga.11818.1.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000064687
Ensembl peptide - ENSGALP00000007992
Ensembl peptide - ENSGALP00000045227
NCBI entrez gene - 422192     See in Manteia.
RefSeq - XM_015278224
RefSeq - NM_001277886
RefSeq - XM_015278223
RefSeq Peptide - NP_001264815
swissprot - F1NI87
swissprot - A0A1L1S0Q0
Ensembl - ENSGALG00000004999
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 taf7ENSDARG00000019572Danio rerio
 TAF7ENSG00000178913Homo sapiens
 Taf7ENSMUSG00000051316Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006751  TAFII55 protein, conserved region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006352 DNA-templated transcription, initiation IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter IEA
 biological_processGO:0006469 negative regulation of protein kinase activity IEA
 biological_processGO:0030520 intracellular estrogen receptor signaling pathway IEA
 biological_processGO:0035067 negative regulation of histone acetylation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0051123 RNA polymerase II transcriptional preinitiation complex assembly IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0005669 transcription factor TFIID complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0008024 cyclin/CDK positive transcription elongation factor complex IEA
 cellular_componentGO:0033276 transcription factor TFTC complex IEA
 cellular_componentGO:0071339 MLL1 complex IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0035035 histone acetyltransferase binding IEA
 molecular_functionGO:0042809 vitamin D receptor binding IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA
 molecular_functionGO:0046966 thyroid hormone receptor binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0061628 H3K27me3 modified histone binding IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase II Pre-transcription Events
RNA Polymerase II Promoter Escape
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription Initiation
RNA Polymerase II Transcription Initiation And Promoter Clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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