ENSGALG00000005054


Gallus gallus

Features
Gene ID: ENSGALG00000005054
  
Biological name :DKC1
  
Synonyms : DKC1 / H/ACA ribonucleoprotein complex subunit 4
  
Possible biological names infered from orthology : dyskerin pseudouridine synthase 1 / O60832 / Q9ESX5
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 2130910
Gene end: 2140083
  
Corresponding Affymetrix probe sets: Gga.1015.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000064056
Ensembl peptide - ENSGALP00000008091
NCBI entrez gene - 422196     See in Manteia.
RefSeq - NM_001031115
RefSeq Peptide - NP_001026286
swissprot - F1P0Q8
swissprot - A0A1L1RYW4
Ensembl - ENSGALG00000005054
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dkc1ENSDARG00000016484Danio rerio
 DKC1ENSG00000130826Homo sapiens
 Dkc1ENSMUSG00000031403Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002478  PUA domain
 IPR002501  Pseudouridine synthase II, N-terminal
 IPR004521  Uncharacterised domain CHP00451
 IPR004802  tRNA pseudouridine synthase B family
 IPR012960  Dyskerin-like
 IPR015947  PUA-like superfamily
 IPR020103  Pseudouridine synthase, catalytic domain superfamily
 IPR032819  tRNA pseudouridylate synthase B, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001522 pseudouridine synthesis IEA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0007004 telomere maintenance via telomerase IEA
 biological_processGO:0009451 RNA modification IEA
 biological_processGO:0031118 rRNA pseudouridine synthesis IEA
 biological_processGO:0032212 positive regulation of telomere maintenance via telomerase IEA
 biological_processGO:0033979 box H/ACA snoRNA metabolic process IEA
 biological_processGO:0051973 positive regulation of telomerase activity IEA
 biological_processGO:0090669 telomerase RNA stabilization IEA
 biological_processGO:1904851 positive regulation of establishment of protein localization to telomere IEA
 biological_processGO:1904872 regulation of telomerase RNA localization to Cajal body IEA
 biological_processGO:1904874 positive regulation of telomerase RNA localization to Cajal body IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005697 telomerase holoenzyme complex IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0015030 Cajal body IEA
 cellular_componentGO:0031429 box H/ACA snoRNP complex IEA
 cellular_componentGO:0090661 box H/ACA telomerase RNP complex IEA
 molecular_functionGO:0003720 telomerase activity IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0009982 pseudouridine synthase activity IEA
 molecular_functionGO:0034513 box H/ACA snoRNA binding IEA
 molecular_functionGO:0070034 telomerase RNA binding IEA


Pathways (from Reactome)
Pathway description
Telomere Extension By Telomerase


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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