ENSGALG00000005541


Gallus gallus

Features
Gene ID: ENSGALG00000005541
  
Biological name :GJB1
  
Synonyms : gap junction protein beta 1 / GJB1
  
Possible biological names infered from orthology : P08034 / P28230
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 2330650
Gene end: 2333141
  
Corresponding Affymetrix probe sets: Gga.8125.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008876
Ensembl peptide - ENSGALP00000050756
NCBI entrez gene - 378797     See in Manteia.
RefSeq - NM_204371
RefSeq - XM_015278181
RefSeq Peptide - NP_989702
swissprot - Q6URH5
Ensembl - ENSGALG00000005541
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cx27.5ENSDARG00000035553Danio rerio
 cx31.7ENSDARG00000058064Danio rerio
 GJB1ENSG00000169562Homo sapiens
 Gjb1ENSMUSG00000047797Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GJB6 / O93533 / Gap junction beta-6 protein / GJB2* / Q00977* / P29033* / P70689* / O95452* / gap junction protein beta 6* / gap junction protein beta 2*ENSGALG0000001713654
GJB2 / GJB6* / O95452* / P29033* / P70689* / Q00977* / gap junction protein beta 6* / gap junction protein beta 2*ENSGALG0000002272053
GJB3 / gap junction protein beta 3 / O75712* / P28231*ENSGALG0000002842444
GJD4 / gap junction protein delta 4 / Q8BSD4* / Q96KN9*ENSGALG0000000706525


Protein motifs (from Interpro)
Interpro ID Name
 IPR000500  Connexin
 IPR002267  Gap junction beta-1 protein (Cx32)
 IPR013092  Connexin, N-terminal
 IPR017990  Connexin, conserved site
 IPR019570  Gap junction protein, cysteine-rich domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007154 cell communication IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005921 gap junction IEA
 cellular_componentGO:0005922 connexin complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
Oligomerization of connexins into connexons
Gap junction assembly


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000005541 GJB1 / gap junction protein beta 1 / P08034* / P28230*  / complex / reaction






 

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