ENSGALG00000005589


Gallus gallus

Features
Gene ID: ENSGALG00000005589
  
Biological name :SYNGR3
  
Synonyms : synaptogyrin 3 / SYNGR3
  
Possible biological names infered from orthology : O43761 / Q8R191
  
Species: Gallus gallus
  
Chr. number: 14
Strand: 1
Band:
Gene start: 6216940
Gene end: 6236474
  
Corresponding Affymetrix probe sets: Gga.5906.1.S1_at (Chicken Array)   GgaAffx.11801.1.S1_at (Chicken Array)   GgaAffx.11801.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008955
NCBI entrez gene - 416548     See in Manteia.
RefSeq - NM_001007834
RefSeq Peptide - NP_001007835
swissprot - Q5ZLN6
Ensembl - ENSGALG00000005589
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 syngr3aENSDARG00000014871Danio rerio
 syngr3bENSDARG00000025034Danio rerio
 O43761ENSG00000127561Homo sapiens
 Q8R191ENSMUSG00000007021Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SYNGR1 / synaptogyrin 1 / O43759* / O55100*ENSGALG0000002766553
SYNGR2 / Gallus gallus synaptogyrin 2 (SYNGR2), mRNA. / O43760* / O55101* / synaptogyrin 2*ENSGALG0000002790248


Protein motifs (from Interpro)
Interpro ID Name
 IPR008253  Marvel domain
 IPR016579  Synaptogyrin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032411 positive regulation of transporter activity IEA
 biological_processGO:0045055 regulated exocytosis IEA
 cellular_componentGO:0008021 synaptic vesicle IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030672 synaptic vesicle membrane IBA
 cellular_componentGO:0031594 neuromuscular junction IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0042169 SH2 domain binding IEA
 molecular_functionGO:0047485 protein N-terminus binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr