ENSMUSG00000007021


Mus musculus

Features
Gene ID: ENSMUSG00000007021
  
Biological name :Syngr3
  
Synonyms : Q8R191 / Synaptogyrin-3 / Syngr3
  
Possible biological names infered from orthology : O43761
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: A3.3
Gene start: 24685092
Gene end: 24689955
  
Corresponding Affymetrix probe sets: 10448694 (MoGene1.0st)   1416098_at (Mouse Genome 430 2.0 Array)   1448216_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000007236
NCBI entrez gene - 20974     See in Manteia.
MGI - MGI:1341881
RefSeq - NM_011522
RefSeq Peptide - NP_035652
swissprot - Q8R191
Ensembl - ENSMUSG00000007021
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 syngr3aENSDARG00000014871Danio rerio
 syngr3bENSDARG00000025034Danio rerio
 SYNGR3ENSGALG00000005589Gallus gallus
 O43761ENSG00000127561Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O55100 / Syngr1 / synaptogyrin 1 / O43759*ENSMUSG0000002241551
O55101 / Syngr2 / Synaptogyrin-2 / O43760*ENSMUSG0000004827745
Syngr4 / synaptogyrin 4 / O95473*ENSMUSG0000004023128


Protein motifs (from Interpro)
Interpro ID Name
 IPR008253  Marvel domain
 IPR016579  Synaptogyrin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032411 positive regulation of transporter activity IMP
 biological_processGO:0045055 regulated exocytosis IMP
 cellular_componentGO:0008021 synaptic vesicle IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030672 synaptic vesicle membrane IBA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0031594 neuromuscular junction IDA
 cellular_componentGO:0045202 synapse IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042169 SH2 domain binding IDA
 molecular_functionGO:0047485 protein N-terminus binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002064 seizures "sudden and often acute manifestation of epileptic attack, sometimes convulsive" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: En1tm1Alj/En1tm8.1Alj,En2tm1Alj/En2tm6Alj,Gt(ROSA)26Sortm1(cre/ERT2)Alj/Gt(ROSA)26Sor+
Genetic Background: involves: 129S2/SvPas * 129S6/SvEvTac * Swiss Webster

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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