ENSGALG00000005597


Gallus gallus

Features
Gene ID: ENSGALG00000005597
  
Biological name :CNN3
  
Synonyms : CNN3 / Gallus gallus calponin 3 (CNN3), mRNA.
  
Possible biological names infered from orthology : calponin 3 / Q15417 / Q9DAW9
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 13438299
Gene end: 13460236
  
Corresponding Affymetrix probe sets: Gga.4622.1.S1_at (Chicken Array)   Gga.4622.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057760
Ensembl peptide - ENSGALP00000063998
Ensembl peptide - ENSGALP00000063904
Ensembl peptide - ENSGALP00000063174
Ensembl peptide - ENSGALP00000060821
Ensembl peptide - ENSGALP00000038287
NCBI entrez gene - 424485     See in Manteia.
RefSeq - NM_001354671
RefSeq - XM_015290732
RefSeq Peptide - NP_001341600
swissprot - E1BSX2
swissprot - A0A1D5PXR3
swissprot - A0A1L1RYR0
swissprot - A0A1L1RWF6
Ensembl - ENSGALG00000005597
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cnn3aENSDARG00000099510Danio rerio
 cnn3bENSDARG00000029856Danio rerio
 CNN3ENSG00000117519Homo sapiens
 Cnn3ENSMUSG00000053931Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CNN2 / calponin 2 / Q08093* / Q99439*ENSGALG0000002777760
TAGLN3 / transgelin 3 / Q9R1Q8* / Q9UI15*ENSGALG0000001537927
TAGLN / P19966 / Transgelin / P37804* / Q01995*ENSGALG0000001190225
TAGLN2 / transgelin 2 / P37802* / Q9WVA4*ENSGALG0000003608619


Protein motifs (from Interpro)
Interpro ID Name
 IPR000557  Calponin repeat
 IPR001715  Calponin homology domain
 IPR001997  Calponin/LIMCH1
 IPR003096  Smooth muscle protein/calponin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030855 epithelial cell differentiation IEA
 biological_processGO:0031032 actomyosin structure organization IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005913 cell-cell adherens junction IEA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005516 calmodulin binding IEA
 molecular_functionGO:0098641 cadherin binding involved in cell-cell adhesion IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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