ENSDARG00000029856


Danio rerio

Features
Gene ID: ENSDARG00000029856
  
Biological name :cnn3b
  
Synonyms : calponin 3, acidic b / cnn3b
  
Possible biological names infered from orthology : calponin 3 / CNN3 / Q15417 / Q9DAW9
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 15048410
Gene end: 15075295
  
Corresponding Affymetrix probe sets: Dr.25752.1.A1_at (Zebrafish Array)   NM_001024073_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000058483
Ensembl peptide - ENSDARP00000122032
NCBI entrez gene - 337142     See in Manteia.
RefSeq - NM_001024073
RefSeq Peptide - NP_001019244
swissprot - Q32PU2
swissprot - Q502K8
ZFIN ID - ZDB-GENE-050522-263
Ensembl - ENSDARG00000029856
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CNN3ENSGALG00000005597Gallus gallus
 CNN3ENSG00000117519Homo sapiens
 Cnn3ENSMUSG00000053931Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cnn3a / calponin 3, acidic a / CNN3* / Q15417* / Q9DAW9* / calponin 3*ENSDARG0000009951089
cnn2 / calponin 2 / Q08093* / Q99439*ENSDARG0000003585866
cnn1b / calponin 1, basic, smooth muscle, b / CNN1* / P51911* / Q08091* / calponin 1*ENSDARG0000010239860
cnn1a / calponin 1, basic, smooth muscle, a / CNN1* / P51911* / Q08091* / calponin 1*ENSDARG0000001719355
tagln2 / transgelin 2 / TAGLN* / Q01995* / P37804* / transgelin*ENSDARG0000003346628
tagln / transgelin / P37804* / Q01995*ENSDARG0000004540826
tagln3a / transgelin 3a / TAGLN3* / Q9R1Q8* / Q9UI15* / transgelin 3*ENSDARG0000007980524


Protein motifs (from Interpro)
Interpro ID Name
 IPR000557  Calponin repeat
 IPR001715  Calponin homology domain
 IPR001997  Calponin/LIMCH1
 IPR003096  Smooth muscle protein/calponin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031032 actomyosin structure organization IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005516 calmodulin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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