ENSDARG00000079805


Danio rerio

Features
Gene ID: ENSDARG00000079805
  
Biological name :tagln3a
  
Synonyms : tagln3a / transgelin 3a
  
Possible biological names infered from orthology : Q9R1Q8 / Q9UI15 / TAGLN3 / transgelin 3
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 67869785
Gene end: 67878064
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101713
NCBI entrez gene - 563096     See in Manteia.
RefSeq - NM_001103114
RefSeq Peptide - NP_001096584
swissprot - A2BEV4
ZFIN ID - ZDB-GENE-060531-53
Ensembl - ENSDARG00000079805
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TAGLN3ENSGALG00000015379Gallus gallus
 Q9UI15ENSG00000144834Homo sapiens
 Q9R1Q8ENSMUSG00000022658Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tagln2 / transgelin 2 / TAGLN* / Q01995* / P37804* / transgelin*ENSDARG0000003346663
tagln / transgelin / P37804* / Q01995*ENSDARG0000004540862
cnn2 / calponin 2 / Q08093* / Q99439*ENSDARG0000003585838
cnn3b / calponin 3, acidic b / CNN3* / Q15417* / Q9DAW9* / calponin 3*ENSDARG0000002985638
cnn3a / calponin 3, acidic a / CNN3* / Q15417* / Q9DAW9* / calponin 3*ENSDARG0000009951038
cnn1b / calponin 1, basic, smooth muscle, b / CNN1* / P51911* / Q08091* / calponin 1*ENSDARG0000010239834
cnn1a / calponin 1, basic, smooth muscle, a / CNN1* / P51911* / Q08091* / calponin 1*ENSDARG0000001719332


Protein motifs (from Interpro)
Interpro ID Name
 IPR000557  Calponin repeat
 IPR001061  Transgelin-2
 IPR001715  Calponin homology domain
 IPR003096  Smooth muscle protein/calponin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr