ENSDARG00000035858


Danio rerio

Features
Gene ID: ENSDARG00000035858
  
Biological name :cnn2
  
Synonyms : calponin 2 / cnn2
  
Possible biological names infered from orthology : Q08093 / Q99439
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 24548249
Gene end: 24554432
  
Corresponding Affymetrix probe sets: Dr.26422.1.A1_at (Zebrafish Array)   NM_213349_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000052060
NCBI entrez gene - 406658     See in Manteia.
RefSeq - NM_213349
RefSeq Peptide - NP_998514
swissprot - Q4F876
ZFIN ID - ZDB-GENE-030131-542
Ensembl - ENSDARG00000035858
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CNN2ENSGALG00000027777Gallus gallus
 CNN2ENSG00000064666Homo sapiens
 Cnn2ENSMUSG00000004665Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cnn3a / calponin 3, acidic a / CNN3* / Q15417* / Q9DAW9* / calponin 3*ENSDARG0000009951072
cnn3b / calponin 3, acidic b / CNN3* / Q15417* / Q9DAW9* / calponin 3*ENSDARG0000002985671
cnn1b / calponin 1, basic, smooth muscle, b / CNN1* / P51911* / Q08091* / calponin 1*ENSDARG0000010239861
cnn1a / calponin 1, basic, smooth muscle, a / CNN1* / P51911* / Q08091* / calponin 1*ENSDARG0000001719355
tagln2 / transgelin 2 / TAGLN* / Q01995* / P37804* / transgelin*ENSDARG0000003346630
tagln / transgelin / P37804* / Q01995*ENSDARG0000004540828
tagln3a / transgelin 3a / TAGLN3* / Q9R1Q8* / Q9UI15* / transgelin 3*ENSDARG0000007980526


Protein motifs (from Interpro)
Interpro ID Name
 IPR000557  Calponin repeat
 IPR001715  Calponin homology domain
 IPR001997  Calponin/LIMCH1
 IPR003096  Smooth muscle protein/calponin
 IPR029974  Calponin-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0031032 actomyosin structure organization IEA
 biological_processGO:0043408 regulation of MAPK cascade IMP
 biological_processGO:0043535 regulation of blood vessel endothelial cell migration IMP
 cellular_componentGO:0005856 cytoskeleton IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005516 calmodulin binding IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr