ENSDARG00000045408


Danio rerio

Features
Gene ID: ENSDARG00000045408
  
Biological name :tagln
  
Synonyms : tagln / transgelin
  
Possible biological names infered from orthology : P37804 / Q01995
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 543744
Gene end: 551181
  
Corresponding Affymetrix probe sets: Dr.20602.1.S1_at (Zebrafish Array)   NM_001045467_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000066773
Ensembl peptide - ENSDARP00000129595
NCBI entrez gene - 751758     See in Manteia.
RefSeq - XM_021481469
RefSeq - NM_001045467
RefSeq Peptide - NP_001038932
swissprot - Q0P4B4
ZFIN ID - ZDB-GENE-070912-1
Ensembl - ENSDARG00000045408
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TAGLNENSGALG00000011902Gallus gallus
 TAGLNENSG00000149591Homo sapiens
 TaglnENSMUSG00000032085Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tagln2 / transgelin 2 / TAGLN* / Q01995* / P37804* / transgelin*ENSDARG0000003346678
tagln3a / transgelin 3a / TAGLN3* / Q9R1Q8* / Q9UI15* / transgelin 3*ENSDARG0000007980566
cnn2 / calponin 2 / Q08093* / Q99439*ENSDARG0000003585843
cnn3b / calponin 3, acidic b / CNN3* / Q15417* / Q9DAW9* / calponin 3*ENSDARG0000002985643
cnn3a / calponin 3, acidic a / CNN3* / Q15417* / Q9DAW9* / calponin 3*ENSDARG0000009951043
cnn1b / calponin 1, basic, smooth muscle, b / CNN1* / P51911* / Q08091* / calponin 1*ENSDARG0000010239839
cnn1a / calponin 1, basic, smooth muscle, a / CNN1* / P51911* / Q08091* / calponin 1*ENSDARG0000001719339


Protein motifs (from Interpro)
Interpro ID Name
 IPR000557  Calponin repeat
 IPR001715  Calponin homology domain
 IPR003096  Smooth muscle protein/calponin
 IPR029976  Transgelin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0051015 actin filament binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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