ENSDARG00000102398


Danio rerio

Features
Gene ID: ENSDARG00000102398
  
Biological name :cnn1b
  
Synonyms : calponin 1, basic, smooth muscle, b / cnn1b
  
Possible biological names infered from orthology : calponin 1 / CNN1 / P51911 / Q08091
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 14463941
Gene end: 14486959
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000134744
NCBI entrez gene - 572250     See in Manteia.
swissprot - A0A0R4IGU0
ZFIN ID - ZDB-GENE-091118-54
Ensembl - ENSDARG00000102398
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CNN1ENSG00000130176Homo sapiens
 Cnn1ENSMUSG00000001349Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cnn3b / calponin 3, acidic b / CNN3* / Q15417* / Q9DAW9* / calponin 3*ENSDARG0000002985668
cnn1a / calponin 1, basic, smooth muscle, a / CNN1* / P51911* / Q08091* / calponin 1*ENSDARG0000001719366
cnn3a / calponin 3, acidic a / CNN3* / Q15417* / Q9DAW9* / calponin 3*ENSDARG0000009951066
cnn2 / calponin 2 / Q08093* / Q99439*ENSDARG0000003585864
tagln2 / transgelin 2 / TAGLN* / Q01995* / P37804* / transgelin*ENSDARG0000003346627
tagln / transgelin / P37804* / Q01995*ENSDARG0000004540826
tagln3a / transgelin 3a / TAGLN3* / Q9R1Q8* / Q9UI15* / transgelin 3*ENSDARG0000007980524


Protein motifs (from Interpro)
Interpro ID Name
 IPR000557  Calponin repeat
 IPR001715  Calponin homology domain
 IPR001997  Calponin/LIMCH1
 IPR003096  Smooth muscle protein/calponin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031032 actomyosin structure organization IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005516 calmodulin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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