ENSDARG00000033466


Danio rerio

Features
Gene ID: ENSDARG00000033466
  
Biological name :tagln2
  
Synonyms : tagln2 / transgelin 2
  
Possible biological names infered from orthology : P37804 / Q01995 / TAGLN / transgelin
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 37087583
Gene end: 37095460
  
Corresponding Affymetrix probe sets: Dr.2363.1.S1_at (Zebrafish Array)   NM_201576_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000130582
Ensembl peptide - ENSDARP00000049899
NCBI entrez gene - 259183     See in Manteia.
RefSeq - NM_201576
RefSeq Peptide - NP_963870
swissprot - A0A0R4IAP6
swissprot - Q803W9
ZFIN ID - ZDB-GENE-020802-2
Ensembl - ENSDARG00000033466
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TAGLNENSGALG00000011902Gallus gallus
 TAGLNENSG00000149591Homo sapiens
 TaglnENSMUSG00000032085Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tagln / transgelin / P37804* / Q01995*ENSDARG0000004540877
tagln3a / transgelin 3a / TAGLN3* / Q9R1Q8* / Q9UI15* / transgelin 3*ENSDARG0000007980567
cnn3b / calponin 3, acidic b / CNN3* / Q15417* / Q9DAW9* / calponin 3*ENSDARG0000002985646
cnn3a / calponin 3, acidic a / CNN3* / Q15417* / Q9DAW9* / calponin 3*ENSDARG0000009951045
cnn2 / calponin 2 / Q08093* / Q99439*ENSDARG0000003585845
cnn1b / calponin 1, basic, smooth muscle, b / CNN1* / P51911* / Q08091* / calponin 1*ENSDARG0000010239840
cnn1a / calponin 1, basic, smooth muscle, a / CNN1* / P51911* / Q08091* / calponin 1*ENSDARG0000001719338


Protein motifs (from Interpro)
Interpro ID Name
 IPR000557  Calponin repeat
 IPR001715  Calponin homology domain
 IPR003096  Smooth muscle protein/calponin
 IPR029976  Transgelin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000902 cell morphogenesis IMP
 biological_processGO:0030036 actin cytoskeleton organization IMP
 cellular_componentGO:0015629 actin cytoskeleton IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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