ENSGALG00000005753


Gallus gallus

Features
Gene ID: ENSGALG00000005753
  
Biological name :
  
Synonyms : Nuclear cap-binding protein subunit 2 / Q5ZKR5
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 2454470
Gene end: 2457397
  
Corresponding Affymetrix probe sets: Gga.6356.1.S1_at (Chicken Array)   Gga.6356.2.S1_s_at (Chicken Array)   Gga.6356.3.S1_at (Chicken Array)   GgaAffx.12122.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000061847
Ensembl peptide - ENSGALP00000009225
NCBI entrez gene - 422214     See in Manteia.
RefSeq - NM_001006430
RefSeq Peptide - NP_001006430
swissprot - Q5ZKR5
swissprot - A0A1L1RSR5
Ensembl - ENSGALG00000005753
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NCBP2 / A6PVI3* / NCBP2L* / P52298* / Q9CQ49* / nuclear cap binding protein subunit 2* / nuclear cap binding protein subunit 2 like*ENSGALG0000000684355


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily
 IPR027157  Nuclear cap-binding protein subunit 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0031047 gene silencing by RNA IEA
 biological_processGO:0045292 mRNA cis splicing, via spliceosome IEA
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005846 nuclear cap binding complex IEA
 molecular_functionGO:0000339 RNA cap binding IEA
 molecular_functionGO:0000340 RNA 7-methylguanosine cap binding ISS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding ISS
 molecular_functionGO:0017069 snRNA binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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