ENSGALG00000005922


Gallus gallus

Features
Gene ID: ENSGALG00000005922
  
Biological name :RPL5
  
Synonyms : 60S ribosomal protein L5 / P22451 / RPL5
  
Possible biological names infered from orthology : P47962 / ribosomal protein L5
  
Species: Gallus gallus
  
Chr. number: 8
Strand: -1
Band:
Gene start: 14082276
Gene end: 14104087
  
Corresponding Affymetrix probe sets: Gga.4962.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050466
Ensembl peptide - ENSGALP00000053175
Ensembl peptide - ENSGALP00000064497
Ensembl peptide - ENSGALP00000057177
Ensembl peptide - ENSGALP00000054221
Ensembl peptide - ENSGALP00000009511
Ensembl peptide - ENSGALP00000050025
NCBI entrez gene - 107053956     See in Manteia.
NCBI entrez gene - 395269     See in Manteia.
RefSeq - XM_015290642
RefSeq - NM_204581
RefSeq Peptide - NP_989912
swissprot - A0A1D5PBA1
swissprot - F2Z4K4
swissprot - A0A1D5PK24
swissprot - P22451
swissprot - A0A1D5PCH7
Ensembl - ENSGALG00000005922
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl5aENSDARG00000020197Danio rerio
 rpl5bENSDARG00000015862Danio rerio
 Rpl5ENSMUSG00000058558Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005485  Ribosomal protein L5 eukaryotic/L18 archaeal
 IPR025607  Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IBA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0008097 5S rRNA binding IEA
 molecular_functionGO:0019843 rRNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr