ENSGALG00000006091


Gallus gallus

Features
Gene ID: ENSGALG00000006091
  
Biological name :HFM1
  
Synonyms : HFM1 / HFM1, ATP dependent DNA helicase homolog
  
Possible biological names infered from orthology : A2PYH4 / D3Z4R1 / Probable ATP-dependent DNA helicase HFM1
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 14585997
Gene end: 14605147
  
Corresponding Affymetrix probe sets: GgaAffx.3797.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000009813
swissprot - E1C287
Ensembl - ENSGALG00000006091
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hfm1ENSDARG00000104288Danio rerio
 HFM1ENSG00000162669Homo sapiens
 Hfm1ENSMUSG00000043410Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR004179  Sec63 domain
 IPR011545  DEAD/DEAH box helicase domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000712 resolution of meiotic recombination intermediates IEA
 biological_processGO:0010501 RNA secondary structure unwinding IBA
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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