ENSGALG00000006220


Gallus gallus

Features
Gene ID: ENSGALG00000006220
  
Biological name :KCNC1
  
Synonyms : KCNC1 / potassium voltage-gated channel subfamily C member 1
  
Possible biological names infered from orthology : P15388 / P48547
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 12203730
Gene end: 12285467
  
Corresponding Affymetrix probe sets: Gga.5065.1.S1_s_at (Chicken Array)   GgaAffx.21859.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000010023
NCBI entrez gene - 423076     See in Manteia.
RefSeq - XM_004941428
RefSeq - XM_004941429
RefSeq - XM_004941431
swissprot - E1BYX5
Ensembl - ENSGALG00000006220
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 kcnc1aENSDARG00000051852Danio rerio
 kcnc1bENSDARG00000032959Danio rerio
 KCNC1ENSG00000129159Homo sapiens
 Kcnc1ENSMUSG00000058975Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KCNC4* / Q03721* / Q8R1C0* / potassium voltage-gated channel subfamily C member 4*ENSGALG0000000040075
KCNC2 / potassium voltage-gated channel subfamily C member 2 / Q14B80* / Q96PR1*ENSGALG0000001020473
KCNC4* / Q03721* / Q8R1C0* / potassium voltage-gated channel subfamily C member 4*ENSGALG0000003385361
KCNA3 / potassium voltage-gated channel subfamily A member 3 / P16390* / P22001*ENSGALG0000003694234
KCNA4 / potassium voltage-gated channel subfamily A member 4 / P22459* / Q61423*ENSGALG0000001214234
KCNA1 / potassium voltage-gated channel subfamily A member 1 / P16388* / Q09470*ENSGALG0000001728034
KCNA6 / potassium voltage-gated channel subfamily A member 6 / P17658* / Q61923*ENSGALG0000004068133
KCNA2 / potassium voltage-gated channel subfamily A member 2 / P16389* / P63141*ENSGALG0000000044233
KCNA10 / Q7T199 / Potassium voltage-gated channel subfamily A member 10 / B2RQA1* / Q16322*ENSGALG0000000044132
KCND3 / potassium voltage-gated channel subfamily D member 3 precursor / Q9UK17* / Q9Z0V1* / potassium voltage-gated channel subfamily D member 3* / potassium voltage-gated channel, Shal-r...ENSGALG0000000151231
KCND2 / potassium voltage-gated channel subfamily D member 2 / Q9NZV8* / Q9Z0V2*ENSGALG0000000906624


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR003131  Potassium channel tetramerisation-type BTB domain
 IPR003968  Potassium channel, voltage dependent, Kv
 IPR003974  Potassium channel, voltage dependent, Kv3
 IPR005403  Potassium channel, voltage dependent, Kv3.1
 IPR005821  Ion transport domain
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR027359  Voltage-dependent channel domain superfamily
 IPR028325  Voltage-gated potassium channel


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006813 potassium ion transport IEA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0051260 protein homooligomerization IEA
 biological_processGO:0051262 protein tetramerization IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0071805 potassium ion transmembrane transport IBA
 cellular_componentGO:0008076 voltage-gated potassium channel complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0030673 axolemma IEA
 cellular_componentGO:0032590 dendrite membrane IEA
 cellular_componentGO:0032809 neuronal cell body membrane IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005249 voltage-gated potassium channel activity IBA
 molecular_functionGO:0005267 potassium channel activity IEA
 molecular_functionGO:0019894 kinesin binding IEA
 molecular_functionGO:0044325 ion channel binding IEA


Pathways (from Reactome)
Pathway description
Voltage gated Potassium channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr