ENSGALG00000006307


Gallus gallus

Features
Gene ID: ENSGALG00000006307
  
Biological name :NSMCE1
  
Synonyms : NSE1 homolog, SMC5-SMC6 complex component / NSMCE1
  
Possible biological names infered from orthology : Q8WV22
  
Species: Gallus gallus
  
Chr. number: 14
Strand: -1
Band:
Gene start: 7322765
Gene end: 7328994
  
Corresponding Affymetrix probe sets: Gga.13680.1.A1_at (Chicken Array)   Gga.13680.1.S1_at (Chicken Array)   Gga.8068.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000010185
Ensembl peptide - ENSGALP00000062786
Ensembl peptide - ENSGALP00000059765
NCBI entrez gene - 416584     See in Manteia.
RefSeq - XM_414884
swissprot - E1BWX7
swissprot - A0A1L1RVD1
swissprot - A0A1L1RLY4
Ensembl - ENSGALG00000006307
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nsmce1ENSDARG00000098780Danio rerio
 NSMCE1ENSG00000169189Homo sapiens
 Nsmce1ENSMUSG00000030750Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR011513  Non-structural maintenance of chromosomes element 1
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR014857  Zinc finger, RING-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000724 double-strand break repair via homologous recombination IBA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006301 postreplication repair IBA
 biological_processGO:0016567 protein ubiquitination IBA
 biological_processGO:2001022 positive regulation of response to DNA damage stimulus IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0030915 Smc5-Smc6 complex IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
SUMOylation of DNA damage response and repair proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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