ENSGALG00000008180


Gallus gallus

Features
Gene ID: ENSGALG00000008180
  
Biological name :SPG11
  
Synonyms : SPG11 / SPG11, spatacsin vesicle trafficking associated
  
Possible biological names infered from orthology : Q3UHA3 / Q96JI7 / Spatacsin
  
Species: Gallus gallus
  
Chr. number: 10
Strand: 1
Band:
Gene start: 19759094
Gene end: 19785369
  
Corresponding Affymetrix probe sets: Gga.10130.1.S1_s_at (Chicken Array)   GgaAffx.22494.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055573
Ensembl peptide - ENSGALP00000037408
NCBI entrez gene - 415572     See in Manteia.
RefSeq - XM_004943939
RefSeq - XM_004943936
RefSeq - XM_004943937
RefSeq - XM_003641831
swissprot - F1P1T9
swissprot - A0A1D5PRP5
Ensembl - ENSGALG00000008180
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 spg11ENSDARG00000045968Danio rerio
 SPG11ENSG00000104133Homo sapiens
 Spg11ENSMUSG00000033396Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR028103  Spatacsin
 IPR028107  Spatacsin, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007040 lysosome organization IEA
 biological_processGO:0007268 chemical synaptic transmission IEA
 biological_processGO:0008088 axo-dendritic transport IEA
 biological_processGO:0048489 synaptic vesicle transport IEA
 biological_processGO:0048675 axon extension IEA
 biological_processGO:0090389 phagosome-lysosome fusion involved in apoptotic cell clearance IEA
 biological_processGO:0090659 walking behavior IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0045202 synapse IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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