ENSGALG00000009169


Gallus gallus

Features
Gene ID: ENSGALG00000009169
  
Biological name :TRMT6
  
Synonyms : TRMT6 / tRNA methyltransferase 6
  
Possible biological names infered from orthology : Mus musculus tRNA methyltransferase 6 (Trmt6), transcript variant 2, mRNA. / Q8CE96 / Q9UJA5
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 16913780
Gene end: 16925275
  
Corresponding Affymetrix probe sets: GgaAffx.12535.1.S1_at (Chicken Array)   GgaAffx.5795.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000062116
Ensembl peptide - ENSGALP00000014919
NCBI entrez gene - 421313     See in Manteia.
NCBI entrez gene - 107056241     See in Manteia.
RefSeq - XM_015301237
RefSeq - NM_001031041
RefSeq - XM_015283630
RefSeq - XM_015283631
RefSeq Peptide - NP_001026212
swissprot - F1NF40
swissprot - A0A1L1RTH5
Ensembl - ENSGALG00000009169
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trmt6ENSDARG00000042344Danio rerio
 TRMT6ENSG00000089195Homo sapiens
 Trmt6ENSMUSG00000037376Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR017423  tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0030488 tRNA methylation IEA
 biological_processGO:0080009 mRNA methylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0031515 tRNA (m1A) methyltransferase complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr