ENSG00000089195


Homo sapiens

Features
Gene ID: ENSG00000089195
  
Biological name :TRMT6
  
Synonyms : Q9UJA5 / TRMT6 / tRNA methyltransferase 6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: -1
Band: p12.3
Gene start: 5937235
Gene end: 5950558
  
Corresponding Affymetrix probe sets: 222768_s_at (Human Genome U133 Plus 2.0 Array)   233970_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000203001
Ensembl peptide - ENSP00000392070
NCBI entrez gene - 51605     See in Manteia.
RefSeq - XM_017027875
RefSeq - NM_001281467
RefSeq - NM_015939
RefSeq Peptide - NP_057023
RefSeq Peptide - NP_001268396
swissprot - Q9UJA5
Ensembl - ENSG00000089195
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trmt6ENSDARG00000042344Danio rerio
 TRMT6ENSGALG00000009169Gallus gallus
 Trmt6ENSMUSG00000037376Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR017423  tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006400 tRNA modification TAS
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0030488 tRNA methylation IEA
 biological_processGO:0080009 mRNA methylation IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0031515 tRNA (m1A) methyltransferase complex IEA
 molecular_functionGO:0003723 RNA binding HDA


Pathways (from Reactome)
Pathway description
tRNA modification in the nucleus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000166166 Q96FX7 / TRMT61A / tRNA methyltransferase 61A  / complex
 ENSG00000089195 TRMT6 / Q9UJA5 / tRNA methyltransferase 6  / complex






 

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contact: otassy@igbmc.fr