ENSGALG00000009185


Gallus gallus

Features
Gene ID: ENSGALG00000009185
  
Biological name :ROM1
  
Synonyms : photoreceptor outer segment membrane glycoprotein 2 / ROM1
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 25967888
Gene end: 25978284
  
Corresponding Affymetrix probe sets: Gga.531.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000014944
NCBI entrez gene - 395898     See in Manteia.
RefSeq - XM_015286980
RefSeq - NM_205037
RefSeq - XM_015286978
RefSeq - XM_015286979
RefSeq - XM_015286976
RefSeq - XM_015286977
RefSeq Peptide - NP_990368
swissprot - F1NF05
Ensembl - ENSGALG00000009185
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 prph2lENSDARG00000021345Danio rerio
 zmp:0000000545ENSDARG00000013134Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PRPH2 / O42281 / Peripherin-2 / P15499* / P23942*ENSGALG0000000990955


Protein motifs (from Interpro)
Interpro ID Name
 IPR000830  Peripherin/rom-1
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018498  Peripherin/rom-1, conserved site
 IPR018499  Tetraspanin/Peripherin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 biological_processGO:0007601 visual perception IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr