ENSDARG00000021345


Danio rerio

Features
Gene ID: ENSDARG00000021345
  
Biological name :prph2l
  
Synonyms : peripherin 2, like / prph2l
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 27384138
Gene end: 27390258
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000002686
NCBI entrez gene - 567873     See in Manteia.
RefSeq - NM_001111194
RefSeq Peptide - NP_001104664
swissprot - A9JRF5
ZFIN ID - ZDB-GENE-041001-147
Ensembl - ENSDARG00000021345
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ROM1ENSGALG00000009185Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zmp:0000000545ENSDARG0000001313472
prph2a / peripherin 2a (retinal degeneration, slow) / PRPH2* / P15499* / P23942* / peripherin 2*ENSDARG0000003801849
prph2b / peripherin 2b (retinal degeneration, slow) / PRPH2* / P15499* / P23942* / peripherin 2*ENSDARG0000001484047
rom1b / retinal outer segment membrane protein 1b / ROM1* / Q03395* / P32958* / Rod outer segment membrane protein 1 * / retinal outer segment membrane protein 1*ENSDARG0000002692645
rom1a / retinal outer segment membrane protein 1a / ROM1* / Q03395* / P32958* / Rod outer segment membrane protein 1 * / retinal outer segment membrane protein 1*ENSDARG0000001975245


Protein motifs (from Interpro)
Interpro ID Name
 IPR000830  Peripherin/rom-1
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018499  Tetraspanin/Peripherin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 biological_processGO:0007601 visual perception IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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