ENSGALG00000009352


Gallus gallus

Features
Gene ID: ENSGALG00000009352
  
Biological name :DPF3
  
Synonyms : DPF3 / P58270 / Zinc finger protein DPF3
  
Possible biological names infered from orthology : double PHD fingers 3 / P58269 / Q92784
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 26488837
Gene end: 26646463
  
Corresponding Affymetrix probe sets: Gga.46.1.S1_a_at (Chicken Array)   Gga.46.3.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000064421
Ensembl peptide - ENSGALP00000015213
Ensembl peptide - ENSGALP00000015214
Ensembl peptide - ENSGALP00000044912
Ensembl peptide - ENSGALP00000063935
NCBI entrez gene - 395351     See in Manteia.
RefSeq - XM_015286928
RefSeq - XM_015286923
RefSeq - XM_015286924
RefSeq - XM_015286925
RefSeq - XM_015286926
RefSeq - XM_015286927
RefSeq - NM_204639
RefSeq - XM_015286922
RefSeq Peptide - NP_989970
swissprot - F1P0N4
swissprot - F1P0N5
swissprot - A0A1D5NX19
swissprot - P58270
Ensembl - ENSGALG00000009352
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dpf3ENSDARG00000025309Danio rerio
 DPF3ENSG00000205683Homo sapiens
 Dpf3ENSMUSG00000021221Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PHF10 / PHD finger protein 10 / Q8WUB8*ENSGALG0000001119218


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR019787  Zinc finger, PHD-finger
 IPR025750  Requiem/DPF N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007399 nervous system development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0071565 nBAF complex IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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