ENSMUSG00000021221


Mus musculus

Features
Gene ID: ENSMUSG00000021221
  
Biological name :Dpf3
  
Synonyms : Dpf3 / P58269 / Zinc finger protein DPF3
  
Possible biological names infered from orthology : double PHD fingers 3 / Q92784
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: D1
Gene start: 83213745
Gene end: 83487716
  
Corresponding Affymetrix probe sets: 10401359 (MoGene1.0st)   1441659_at (Mouse Genome 430 2.0 Array)   1450162_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000120700
Ensembl peptide - ENSMUSP00000136740
Ensembl peptide - ENSMUSP00000137477
Ensembl peptide - ENSMUSP00000122004
Ensembl peptide - ENSMUSP00000121199
Ensembl peptide - ENSMUSP00000122598
Ensembl peptide - ENSMUSP00000136280
NCBI entrez gene - 70127     See in Manteia.
MGI - MGI:1917377
RefSeq - NM_001267626
RefSeq - NM_001267625
RefSeq - NM_058212
RefSeq Peptide - NP_001254554
RefSeq Peptide - NP_478119
RefSeq Peptide - NP_001254555
swissprot - P58269
swissprot - B8JJH9
swissprot - F6T820
swissprot - F7CL41
swissprot - F7CPB1
Ensembl - ENSMUSG00000021221
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dpf3ENSDARG00000025309Danio rerio
 DPF3ENSGALG00000009352Gallus gallus
 DPF3ENSG00000205683Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Dpf1 / Q9QX66 / Zinc finger protein neuro-d4 / Q92782* / double PHD fingers 1*ENSMUSG0000003058468
Dpf2 / Q61103 / Zinc finger protein ubi-d4 / Q92785* / double PHD fingers 2*ENSMUSG0000002482662
Phf10 / PHD finger protein 10 / Q8WUB8*ENSMUSG0000002388321


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR019787  Zinc finger, PHD-finger
 IPR025750  Requiem/DPF N-terminal domain
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007399 nervous system development IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0071565 nBAF complex IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Stat4ity14/Stat4ity14
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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