ENSGALG00000010343


Gallus gallus

Features
Gene ID: ENSGALG00000010343
  
Biological name :TSPAN1
  
Synonyms : tetraspanin-1 / TSPAN1
  
Possible biological names infered from orthology : O60635 / Q99J59
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 21558802
Gene end: 21562690
  
Corresponding Affymetrix probe sets: Gga.5527.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016821
Ensembl peptide - ENSGALP00000061030
NCBI entrez gene - 424607     See in Manteia.
RefSeq - NM_001277590
RefSeq Peptide - NP_001264519
swissprot - F1NBL2
Ensembl - ENSGALG00000010343
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tspan1ENSDARG00000052027Danio rerio
 O60635ENSG00000117472Homo sapiens
 Q99J59ENSMUSG00000028699Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TSPAN18 / tetraspanin-18 / Q80WR1* / Q96SJ8*ENSGALG0000003690136
TSPAN9 / tetraspanin 9 / O75954* / Q8BJU2* / Mus musculus tetraspanin 9 (Tspan9), transcript variant 2, mRNA.*ENSGALG0000001434631
CD82 / CD82 molecule / P27701* / P40237* / CD82 antigen *ENSGALG0000003821729
TSPAN8 / tetraspanin 8 / P19075* / Q8R3G9*ENSGALG0000001015228
ENSGALG0000004286628
TSPAN4 / tetraspanin 4 / O14817* / Q9DCK3*ENSGALG0000000683725
CD81 / CD81 antigen / P35762* / P60033* / CD81 molecule*ENSGALG0000000654624
TSPAN2 / tetraspanin 2 / O60636* / Q922J6*ENSGALG0000000255424
CD9 / CD9 molecule / P21926* / P40240* / CD9 antigen *ENSGALG0000001727424
TSPAN19 / tetraspanin 19 / P0C672*ENSGALG0000002710317


Protein motifs (from Interpro)
Interpro ID Name
 IPR000301  Tetraspanin
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018499  Tetraspanin/Peripherin
 IPR018503  Tetraspanin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0016477 cell migration IEA
 biological_processGO:0045807 positive regulation of endocytosis IEA
 biological_processGO:0050821 protein stabilization IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0031982 vesicle IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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