ENSGALG00000010384


Gallus gallus

Features
Gene ID: ENSGALG00000010384
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : AC020636.2 / clarin 1 / CLRN1 / P58418 / Q8K445
  
Species: Gallus gallus
  
Chr. number: 9
Strand: 1
Band:
Gene start: 23697558
Gene end: 23701239
  
Corresponding Affymetrix probe sets: Gga.12216.1.S1_at (Chicken Array)   GgaAffx.23222.1.S1_at (Chicken Array)   GgaAffx.6563.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016895
NCBI entrez gene - 771718     See in Manteia.
RefSeq - XM_001233893
RefSeq - XM_004943577
swissprot - E1C4Z0
Ensembl - ENSGALG00000010384
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clrn1ENSDARG00000102890Danio rerio
 AC020636.2ENSG00000260234Homo sapiens
 CLRN1ENSG00000163646Homo sapiens
 Clrn1ENSMUSG00000043850Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLRN2 / clarin 2 / A0PK11*ENSGALG0000002745347
CLRN3 / clarin 3 / Q8BHH8* / Q8NCR9*ENSGALG0000000978721


Protein motifs (from Interpro)
Interpro ID Name
 IPR026748  Clarin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007605 sensory perception of sound IEA
 biological_processGO:0050885 neuromuscular process controlling balance IEA
 biological_processGO:0060088 auditory receptor cell stereocilium organization IEA
 biological_processGO:0060117 auditory receptor cell development IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030140 trans-Golgi network transport vesicle IEA
 cellular_componentGO:0032420 stereocilium IEA
 cellular_componentGO:0045178 basal part of cell IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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