ENSGALG00000010719


Gallus gallus

Features
Gene ID: ENSGALG00000010719
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 42526294
Gene end: 42543086
  
Corresponding Affymetrix probe sets: Gga.18770.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000017422
NCBI entrez gene - 428750     See in Manteia.
RefSeq - XM_426306
swissprot - E1C286
Ensembl - ENSGALG00000010719
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 neil3ENSDARG00000020079Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NEIL2 / endonuclease 8-like 2 / Q6R2P8* / Q969S2* / nei like DNA glycosylase 2*ENSGALG0000001666410


Protein motifs (from Interpro)
Interpro ID Name
 IPR000214  Zinc finger, DNA glycosylase/AP lyase-type
 IPR001876  Zinc finger, RanBP2-type
 IPR010666  Zinc finger, GRF-type
 IPR010979  Ribosomal protein S13-like, H2TH
 IPR012319  Formamidopyrimidine-DNA glycosylase, catalytic domain
 IPR015886  DNA glycosylase/AP lyase, H2TH DNA-binding
 IPR015887  DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006284 base-excision repair IEA
 biological_processGO:0006289 nucleotide-excision repair IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003684 damaged DNA binding IEA
 molecular_functionGO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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