ENSGALG00000010820


Gallus gallus

Features
Gene ID: ENSGALG00000010820
  
Biological name :CHGA
  
Synonyms : CHGA / chromogranin A
  
Possible biological names infered from orthology : Chromogranin-A Pancreastatin Beta-granin WE-14 Catestatin GE-25 Serpinin-RRG Serpinin p-Glu serpinin / P10645 / P26339
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 44953316
Gene end: 44963482
  
Corresponding Affymetrix probe sets: Gga.12437.2.S1_at (Chicken Array)   GgaAffx.21576.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000017570
NCBI entrez gene - 423420     See in Manteia.
RefSeq - XM_421330
swissprot - F1NLZ2
Ensembl - ENSGALG00000010820
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chgaENSDARG00000008829Danio rerio
 CHGAENSG00000100604Homo sapiens
 ChgaENSMUSG00000021194Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001819  Chromogranin A/B
 IPR001990  Chromogranin A/B/C
 IPR018054  Chromogranin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002551 mast cell chemotaxis IEA
 biological_processGO:0032762 mast cell cytokine production IEA
 biological_processGO:0033604 negative regulation of catecholamine secretion IEA
 biological_processGO:0043303 mast cell degranulation IEA
 biological_processGO:0045576 mast cell activation IEA
 biological_processGO:0050829 defense response to Gram-negative bacterium IEA
 biological_processGO:0050830 defense response to Gram-positive bacterium IEA
 biological_processGO:2000707 positive regulation of dense core granule biogenesis IEA
 cellular_componentGO:0030141 secretory granule IEA
 cellular_componentGO:0042629 mast cell granule IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA


Pathways (from Reactome)
Pathway description
Antimicrobial peptides


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr