ENSGALG00000011133


Gallus gallus

Features
Gene ID: ENSGALG00000011133
  
Biological name :LIN54
  
Synonyms : LIN54 / lin-54 DREAM MuvB core complex component
  
Possible biological names infered from orthology : Mus musculus lin-54 homolog (C. elegans) (Lin54), transcript variant 3, mRNA. / Q571G4 / Q6MZP7
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 46614184
Gene end: 46634139
  
Corresponding Affymetrix probe sets: Gga.11592.1.S1_at (Chicken Array)   Gga.11592.2.S1_a_at (Chicken Array)   GgaAffx.23461.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047495
Ensembl peptide - ENSGALP00000018125
NCBI entrez gene - 422595     See in Manteia.
RefSeq - XM_420554
RefSeq - XM_003641173
RefSeq - XM_004941117
swissprot - F1NCE0
swissprot - A0A1D5P487
Ensembl - ENSGALG00000011133
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lin54ENSDARG00000063194Danio rerio
 LIN54ENSG00000189308Homo sapiens
 Lin54ENSMUSG00000035310Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TESMIN / testis expressed metallothionein like protein / Q9WTJ6* / Q9Y4I5* / testis expressed metallothionein like*ENSGALG0000004177421


Protein motifs (from Interpro)
Interpro ID Name
 IPR005172  CRC domain
 IPR028307  Lin-54 family
 IPR033467  Tesmin/TSO1-like CXC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
G0 and Early G1


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr