ENSGALG00000012731


Gallus gallus

Features
Gene ID: ENSGALG00000012731
  
Biological name :TBC1D7
  
Synonyms : TBC1D7 / TBC1 domain family member 7
  
Possible biological names infered from orthology : Q9D0K0 / Q9P0N9
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 62416160
Gene end: 62431263
  
Corresponding Affymetrix probe sets: Gga.13467.1.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020750
Ensembl peptide - ENSGALP00000062562
Ensembl peptide - ENSGALP00000062427
Ensembl peptide - ENSGALP00000061243
Ensembl peptide - ENSGALP00000058201
Ensembl peptide - ENSGALP00000047900
Ensembl peptide - ENSGALP00000046300
NCBI entrez gene - 420853     See in Manteia.
RefSeq - XM_004939651
RefSeq - XM_015275976
RefSeq - XM_015275977
RefSeq - XM_418942
swissprot - A0A1D5P5D2
swissprot - E1BYH9
swissprot - A0A1D5P0X1
swissprot - A0A1L1RUC5
swissprot - A0A1L1RR07
swissprot - A0A1D5PYZ3
Ensembl - ENSGALG00000012731
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 F1QRX7ENSDARG00000029581Danio rerio
 Q9P0N9ENSG00000145979Homo sapiens
 Q9D0K0ENSMUSG00000021368Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031398 positive regulation of protein ubiquitination IEA
 biological_processGO:0032007 negative regulation of TOR signaling IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0070848 response to growth factor IEA
 biological_processGO:0090630 activation of GTPase activity IEA
 biological_processGO:1902018 negative regulation of cilium assembly IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0036064 ciliary basal body IEA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IEA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr