ENSGALG00000012798


Gallus gallus

Features
Gene ID: ENSGALG00000012798
  
Biological name :SSR1
  
Synonyms : SSR1 / translocon-associated protein subunit alpha precursor
  
Possible biological names infered from orthology : P43307 / Q9CY50 / signal sequence receptor subunit 1 / Translocon-associated protein subunit alpha
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 64832762
Gene end: 64842461
  
Corresponding Affymetrix probe sets: GgaAffx.11624.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000060916
Ensembl peptide - ENSGALP00000020852
Ensembl peptide - ENSGALP00000056317
NCBI entrez gene - 420871     See in Manteia.
RefSeq - XM_015275891
RefSeq - NM_001006375
RefSeq - XM_015275890
RefSeq Peptide - NP_001006375
swissprot - F1P4F4
swissprot - A0A1D5PTR7
Ensembl - ENSGALG00000012798
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ssr1ENSDARG00000101627Danio rerio
 SSR1ENSG00000124783Homo sapiens
 Ssr1ENSMUSG00000021427Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005595  Translocon-associated protein (TRAP), alpha subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006613 cotranslational protein targeting to membrane IBA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr