ENSGALG00000012821


Gallus gallus

Features
Gene ID: ENSGALG00000012821
  
Biological name :TUBB2B
  
Synonyms : P32882 / TUBB2B / Tubulin beta-2 chain
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 66508228
Gene end: 66526459
  
Corresponding Affymetrix probe sets: Gga.16470.1.S1_at (Chicken Array)   Gga.1815.1.S1_at (Chicken Array)   GgaAffx.20867.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020884
Ensembl peptide - ENSGALP00000042274
Ensembl peptide - ENSGALP00000064552
Ensembl peptide - ENSGALP00000060924
Ensembl peptide - ENSGALP00000046151
Ensembl peptide - ENSGALP00000045833
Ensembl peptide - ENSGALP00000045257
NCBI entrez gene - 420883     See in Manteia.
NCBI entrez gene - 768337     See in Manteia.
RefSeq - NM_001004400
RefSeq - XM_001231209
RefSeq - XM_015275895
RefSeq Peptide - NP_001004400
swissprot - A0A1D5NY03
swissprot - A0A1L1S095
swissprot - P32882
swissprot - G1K338
swissprot - A0A1L1RQ48
swissprot - A0A1D5P0H3
swissprot - A0A1D5NZL5
Ensembl - ENSGALG00000012821
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TUBB4B / tubulin beta-3 chain ENSGALG0000000858696
TUBB3* / Q13509* / Q9ERD7* / AC092143.1* / tubulin beta 3 class III*ENSGALG0000000005995
TUBB6 / P09653 / Tubulin beta-5 chain / Q9BUF5* / Q922F4* / tubulin beta 6 class V*ENSGALG0000003127592
TUBB1 / P09207 / Tubulin beta-6 chain / Q9H4B7* / A2AQ07* / tubulin beta 1 class VI*ENSGALG0000000744785
TUBE1* / Q9D6T1* / Q9UJT0* / epsilon-tubulin 1* / tubulin epsilon 1*ENSGALG0000001501731
TUBD1 / tubulin delta 1 / Q9R1K7* / Q9UJT1*ENSGALG0000000517322


Protein motifs (from Interpro)
Interpro ID Name
 IPR000217  Tubulin
 IPR002453  Beta tubulin
 IPR003008  Tubulin/FtsZ, GTPase domain
 IPR008280  Tubulin/FtsZ, C-terminal
 IPR013838  Beta tubulin, autoregulation binding site
 IPR017975  Tubulin, conserved site
 IPR018316  Tubulin/FtsZ, 2-layer sandwich domain
 IPR023123  Tubulin, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0007017 microtubule-based process IEA
 biological_processGO:0031115 negative regulation of microtubule polymerization IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005200 structural constituent of cytoskeleton IEA
 molecular_functionGO:0005509 calcium ion binding IMP
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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