ENSGALG00000005173


Gallus gallus

Features
Gene ID: ENSGALG00000005173
  
Biological name :TUBD1
  
Synonyms : TUBD1 / tubulin delta 1
  
Possible biological names infered from orthology : Q9R1K7 / Q9UJT1
  
Species: Gallus gallus
  
Chr. number: 19
Strand: -1
Band:
Gene start: 7384646
Gene end: 7391492
  
Corresponding Affymetrix probe sets: Gga.11728.1.S1_at (Chicken Array)   Gga.11728.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008290
Ensembl peptide - ENSGALP00000064320
Ensembl peptide - ENSGALP00000053634
NCBI entrez gene - 417636     See in Manteia.
RefSeq - XM_415881
RefSeq - XM_015296135
RefSeq - XM_015296136
RefSeq - XM_015296137
RefSeq - XM_015296124
RefSeq - XM_015296125
RefSeq - XM_015296126
RefSeq - XM_015296127
RefSeq - XM_015296128
RefSeq - XM_015296129
RefSeq - XM_015296130
RefSeq - XM_015296131
RefSeq - XM_015296132
RefSeq - XM_015296133
RefSeq - XM_015296134
swissprot - E1BW87
swissprot - A0A1L1RZL3
swissprot - A0A1D5PLB8
Ensembl - ENSGALG00000005173
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tubd1ENSDARG00000058219Danio rerio
 TUBD1ENSG00000108423Homo sapiens
 Tubd1ENSMUSG00000020513Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TUBE1* / Q9D6T1* / Q9UJT0* / epsilon-tubulin 1* / tubulin epsilon 1*ENSGALG0000001501725
P32882 / TUBB2B / Tubulin beta-2 chain ENSGALG0000001282122
TUBB1 / P09207 / Tubulin beta-6 chain / Q9H4B7* / A2AQ07* / tubulin beta 1 class VI*ENSGALG0000000744722
TUBB3* / Q13509* / Q9ERD7* / AC092143.1* / tubulin beta 3 class III*ENSGALG0000000005922
TUBB4B / tubulin beta-3 chain ENSGALG0000000858622
TUBB6 / P09653 / Tubulin beta-5 chain / Q9BUF5* / Q922F4* / tubulin beta 6 class V*ENSGALG0000003127521


Protein motifs (from Interpro)
Interpro ID Name
 IPR000217  Tubulin
 IPR002967  Delta tubulin
 IPR003008  Tubulin/FtsZ, GTPase domain
 IPR008280  Tubulin/FtsZ, C-terminal
 IPR017975  Tubulin, conserved site
 IPR023123  Tubulin, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0007017 microtubule-based process IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005874 microtubule IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005200 structural constituent of cytoskeleton IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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