ENSG00000108423


Homo sapiens

Features
Gene ID: ENSG00000108423
  
Biological name :TUBD1
  
Synonyms : Q9UJT1 / TUBD1 / tubulin delta 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q23.1
Gene start: 59859482
Gene end: 59892945
  
Corresponding Affymetrix probe sets: 210389_x_at (Human Genome U133 Plus 2.0 Array)   221326_s_at (Human Genome U133 Plus 2.0 Array)   231853_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000480387
Ensembl peptide - ENSP00000467915
Ensembl peptide - ENSP00000468518
Ensembl peptide - ENSP00000320797
Ensembl peptide - ENSP00000342399
Ensembl peptide - ENSP00000342561
Ensembl peptide - ENSP00000365262
Ensembl peptide - ENSP00000377785
Ensembl peptide - ENSP00000441757
Ensembl peptide - ENSP00000465579
Ensembl peptide - ENSP00000466681
Ensembl peptide - ENSP00000467480
NCBI entrez gene - 51174     See in Manteia.
OMIM - 607344
RefSeq - XM_017024720
RefSeq - NM_001193610
RefSeq - NM_001193611
RefSeq - NM_001193612
RefSeq - NM_001193613
RefSeq - NM_016261
RefSeq - XM_005257425
RefSeq - XM_011524871
RefSeq - XM_017024716
RefSeq - XM_017024717
RefSeq - XM_017024718
RefSeq - XM_017024719
RefSeq - NM_001193609
RefSeq Peptide - NP_001180539
RefSeq Peptide - NP_001180540
RefSeq Peptide - NP_001180541
RefSeq Peptide - NP_001180542
RefSeq Peptide - NP_057345
RefSeq Peptide - NP_001180538
swissprot - K7EPQ0
swissprot - K7EQN9
swissprot - K7EMW6
swissprot - Q9UJT1
swissprot - K7EKE2
Ensembl - ENSG00000108423
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tubd1ENSDARG00000058219Danio rerio
 TUBD1ENSGALG00000005173Gallus gallus
 Tubd1ENSMUSG00000020513Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TUBE1 / Q9UJT0 / tubulin epsilon 1ENSG0000007493526
TUBB8 / Q3ZCM7 / tubulin beta 8 class VIIIENSG0000026145624
P68371 / TUBB4B / tubulin beta 4B class IVbENSG0000018822923
A6NNZ2 / TUBB8P12 / tubulin beta 8 pseudogene 12ENSG0000017321323
TUBB / P07437 / tubulin beta class IENSG0000019623022
TUBB3 / Q13509 / tubulin beta 3 class IIIENSG0000025894722
Q9BVA1 / TUBB2B / tubulin beta 2B class IIbENSG0000013728522
Q13885 / TUBB2A / tubulin beta 2A class IIaENSG0000013726722
P04350 / TUBB4A / tubulin beta 4A class IVaENSG0000010483322
TUBB6 / Q9BUF5 / tubulin beta 6 class VENSG0000017601421
TUBB1 / Q9H4B7 / tubulin beta 1 class VIENSG0000010116221
AC092143.1ENSG0000019821120
MC1R / Q01726 / melanocortin 1 receptorENSG000002588391


Protein motifs (from Interpro)
Interpro ID Name
 IPR000217  Tubulin
 IPR002967  Delta tubulin
 IPR003008  Tubulin/FtsZ, GTPase domain
 IPR004057  Epsilon tubulin
 IPR008280  Tubulin/FtsZ, C-terminal
 IPR017975  Tubulin, conserved site
 IPR036525  Tubulin/FtsZ, GTPase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0007017 microtubule-based process IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0045880 positive regulation of smoothened signaling pathway ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005814 centriole TAS
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005200 structural constituent of cytoskeleton IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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