ENSG00000137267


Homo sapiens

Features
Gene ID: ENSG00000137267
  
Biological name :TUBB2A
  
Synonyms : Q13885 / TUBB2A / tubulin beta 2A class IIa
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: p25.2
Gene start: 3153669
Gene end: 3157526
  
Corresponding Affymetrix probe sets: 202154_x_at (Human Genome U133 Plus 2.0 Array)   204141_at (Human Genome U133 Plus 2.0 Array)   209372_x_at (Human Genome U133 Plus 2.0 Array)   213476_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000369703
NCBI entrez gene - 7280     See in Manteia.
OMIM - 615101
RefSeq - NM_001310315
RefSeq - NM_001069
RefSeq Peptide - NP_001060
RefSeq Peptide - NP_001297244
swissprot - Q13885
Ensembl - ENSG00000137267
  
Related genetic diseases (OMIM): 615763 - Cortical dysplasia, complex, with other brain malformations 5, 615763
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tubb2ENSDARG00000039522Danio rerio
 Q7TMM9ENSMUSG00000058672Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9BVA1 / TUBB2B / tubulin beta 2B class IIbENSG00000137285100
P68371 / TUBB4B / tubulin beta 4B class IVbENSG0000018822996
TUBB / P07437 / tubulin beta class IENSG0000019623095
P04350 / TUBB4A / tubulin beta 4A class IVaENSG0000010483395
TUBB3 / Q13509 / tubulin beta 3 class IIIENSG0000025894792
TUBB6 / Q9BUF5 / tubulin beta 6 class VENSG0000017601491
AC092143.1ENSG0000019821189
TUBB8 / Q3ZCM7 / tubulin beta 8 class VIIIENSG0000026145688
A6NNZ2 / TUBB8P12 / tubulin beta 8 pseudogene 12ENSG0000017321387
TUBB1 / Q9H4B7 / tubulin beta 1 class VIENSG0000010116279
TUBE1 / Q9UJT0 / tubulin epsilon 1ENSG0000007493533
TUBD1 / Q9UJT1 / tubulin delta 1ENSG0000010842322
MC1R / Q01726 / melanocortin 1 receptorENSG000002588392


Protein motifs (from Interpro)
Interpro ID Name
 IPR000217  Tubulin
 IPR002453  Beta tubulin
 IPR003008  Tubulin/FtsZ, GTPase domain
 IPR008280  Tubulin/FtsZ, C-terminal
 IPR013838  Beta tubulin, autoregulation binding site
 IPR017975  Tubulin, conserved site
 IPR018316  Tubulin/FtsZ, 2-layer sandwich domain
 IPR036525  Tubulin/FtsZ, GTPase domain superfamily
 IPR037103  Tubulin/FtsZ, C-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0007017 microtubule-based process IEA
 cellular_componentGO:0005634 nucleus HDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:1903561 extracellular vesicle HDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005200 structural constituent of cytoskeleton IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Translocation of SLC2A4 (GLUT4) to the plasma membrane
Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane
Gap junction assembly
MHC class II antigen presentation
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
HSP90 chaperone cycle for steroid hormone receptors (SHR)
Recruitment of NuMA to mitotic centrosomes
Prefoldin mediated transfer of substrate to CCT/TriC
Formation of tubulin folding intermediates by CCT/TriC
Post-chaperonin tubulin folding pathway
Recycling pathway of L1
Hedgehog off state
Cilium Assembly
Intraflagellar transport
RHO GTPases activate IQGAPs
RHO GTPases Activate Formins
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic
COPI-independent Golgi-to-ER retrograde traffic
Mitotic Prometaphase
The role of GTSE1 in G2/M progression after G2 checkpoint
Carboxyterminal post-translational modifications of tubulin
Kinesins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002119 Ventriculomegaly 
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 HP:0002365 Hypoplasia of the brainstem 
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 HP:0002521 Hypsarrhythmia "Hypsarrhythmia is abnormal interictal high amplitude waves and a background of irregular spikes demonstrated by electroencephalography (EEG)." [HPO:curators]
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 HP:0002539 Cortical dysplasia 
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 HP:0003828 Variable expressivity 
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 HP:0009879 Cortical gyral simplification "An abnormal reduction of the number and complexity of the pattern of gyrations of the cerebral cortex." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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